BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F01SP1|AL425398
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig847 1633 0.0
>3x_Contig847
Length = 2949
Score = 1633 bits (822), Expect = 0.0
Identities = 829/833 (99%)
Strand = Plus / Minus
Query: 137 ccaatactactgtcggtggtaccaccacgaactcaagtttccaagatacacagtcggtta 196
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2949 ccaatactactgtcggtggtaccanaacgaactcaagtttccaagatacacagtcggtta 2890
Query: 197 cagtagccactagcatgcccaaaccgagctccaagcgctctcacgaacatgatcataagc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 cagtagccactagcatgcccaaaccgagctccaagcgctctcacgaacatgatcataagc 2830
Query: 257 acactcatacacacccacatagatcgaataatccgaataatccaaattgtggccattgcg 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 acactcatacacacccacatagatcgaataatccgaataatccaaattgtggccattgcg 2770
Query: 317 gtacagtcattgttccatcccctgtagccacaataccagcgaaagatgacccatctgtwa 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2769 gtacagtcattgttccatcccctgtagccacaataccagcgaaagatgacccatctgtaa 2710
Query: 377 gtgtaggtgattggactatcaccacgacgaagaggcctattctttctagtgatgagatcg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 gtgtaggtgattggactatcaccacgacgaagaggcctattctttctagtgatgagatcg 2650
Query: 437 acgattggactgagaaattgaagttcccaatcccagaaatgatttttggtcattccagcg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 acgattggactgagaaattgaagttcccaatcccagaaatgatttttggtcattccagcg 2590
Query: 497 ttgaattgaagaacaccaagactcattggtgcatacgattcaatccgttccatgcactta 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 ttgaattgaagaacaccaagactcattggtgcatacgattcaatccgttccatgcactta 2530
Query: 557 gtcaagtaaaacttggggattctgggttaagagtgtcatattccgagaaatggatcaatt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2529 gtcaagtaaaacttggggattctgggttaagagtgtcatattccgagaaatggatcaatt 2470
Query: 617 ccaaacttaagaatagtcaagtgacaaacacagaggaaggattacaattcggaaaacatt 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 ccaaacttaagaatagtcaagtgacaaacacagaggaaggattacaattcggaaaacatt 2410
Query: 677 gggattggtcctatacgactttatacaatgggactgtgtcagaagatagtgaatacaagt 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 gggattggtcctatacgactttatacaatgggactgtgtcagaagatagtgaatacaagt 2350
Query: 737 ttgttgtggataaccagtatcagcttccaatagaaaaattaacaagaagagatcccattt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2349 ttgttgtggataaccagtatcagcttccaatagaaaaattaacaagaagagatcccattt 2290
Query: 797 tattctatgatgatttcattctatttgaagatgaattggcagacaacggtatcagtatgc 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2289 tattctatgatgatttcattctatttgaagatgaattggcagacaacggtatcagtatgc 2230
Query: 857 tttcgataaaacttagggtaatggcagagagacttcttttattatgcagattcttcctaa 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 tttcgataaaacttagggtaatggcagagagacttcttttattatgcagattcttcctaa 2170
Query: 917 gagtcgatgaggtcttgtttaawatcattgatacaagaatatatgtcgaattc 969
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2169 gagtcgatgaggtcttgtttaaaatcattgatacaagaatatatgtcgaattc 2117
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6115
Number of Sequences: 1807
Number of extensions: 6115
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)